Documentation

Citations of SlicerSALT in publications

To acknowledge SlicerSALT as a platform, please cite the Slicer web site and the following SlicerSALT publication:

Vicory J. et al. (2018) SlicerSALT: Shape AnaLysis Toolbox. In: Reuter M., Wachinger C., Lombaert H., Paniagua B., L├╝thi M., Egger B. (eds) Shape in Medical Imaging. ShapeMI 2018. Lecture Notes in Computer Science, vol 11167, pp. 65-72. Springer, Cham. https://doi.org/10.1007/978-3-030-04747-4_6

For more information on citing the Slicer platform, see the following example or visit https://www.slicer.org/wiki/CitingSlicer

Example: (modify the first part according to your use case)

We performed shape analysis and/or visualization in 3D Slicer (www.slicer.org) via the SlicerSALT project (salt.slicer.org, Vicory et al 2018).
General Slicer Guide

Additional information on Slicer and how to use the software.

Slicer training
SlicerSALT Forum

Check out what the community has to say about SlicerSALT.

Discourse SlicerSALT
For Developers

Check out some additional guidelines tailored specifically to developers.

Development guidelines
For Users

Step-by-step tutorials for each packaged method

Tutorials Workshops
Tutorials for the finer steps
Spherical Harmonic Representation Point Distribution Models (SPHARM-PDM) Last updated July 21st 2017.
Study-specific shape analysis (GROUPS) Last updated July 16th 2018.
Shape Regression Last updated February 5th 2019.
Shape Variation Analyzer Last updated December 9th 2019.
Shape analysis via skeletal models Last updated July 1st 2019.
Covariate Significance Testing Last updated July 28th 2020.