Documentation

Citations of SlicerSALT in publications

To acknowledge SlicerSALT as a platform, please cite the Slicer web site and the following SlicerSALT publication:

Vicory J. et al. (2018) SlicerSALT: Shape AnaLysis Toolbox. In: Reuter M., Wachinger C., Lombaert H., Paniagua B., Lüthi M., Egger B. (eds) Shape in Medical Imaging. ShapeMI 2018. Lecture Notes in Computer Science, vol 11167, pp. 65-72. Springer, Cham. https://doi.org/10.1007/978-3-030-04747-4_6

For more information on citing the Slicer platform, see the following example or visit https://www.slicer.org/wiki/CitingSlicer

Example: (modify the first part according to your use case)

We performed shape analysis and/or visualization in 3D Slicer (www.slicer.org) via the SlicerSALT project (salt.slicer.org, Vicory et al 2018).

General Slicer Guide

Additional information on Slicer and how to use the software.

Slicer training

SlicerSALT Forum

Check out what the community has to say about SlicerSALT.

Discourse SlicerSALT

For Developers

Check out some additional guidelines tailored specifically to developers.

Development guidelines

For Users

Step-by-step tutorials for each packaged method

Tutorials Workshops

Tutorials for the finer steps

Spherical Harmonic Representation Point Distribution Models (SPHARM-PDM) Last updated September 2022.
Study-specific shape analysis (GROUPS) Last updated September 2022.
Shape Regression Last updated January 2023.
Shape Variation Analyzer Last updated September 2022.
Shape analysis via skeletal models Last updated September 2022.
Covariate Significance Testing Last updated September 2022.
Surface model segmentation (DentalModelSeg) Last updated September 2022.